[Vp-integration-subgroup] [Vp-reproduce-subgroup] Follow-up of our publication in Frontiers with SCIPOD

[Jacob Barhak]

Thanks Ruth, Thanks Marcella, Thanks Sheriff,

Your reply indicates that you indeed saw the message.

If the issue is time contractions, then it is a lesser issue.

Unlike writing the paper which was a large task, this task is much simpler
since we are not doing the work of making the video / voice cast

In this case we just delegate the task to a 3rd party that does the work.
We just need to pay, support, and approve.

The bottlenecks in this case are:

1. Paying the fee to initiate the work
2. Agree on how to provide feedback - for example we can agree to have one
representative to oversee the video / voice cast creation process. Yet
eventually we need to avoid situations where there will be major omissions
or misrepresentation - eventually all those who are signed on the
origins paper must agree...

Also this matter can wait until your schedule clears.

However, if there is no single contributor who is interested in securing
funds or handling the process, then this idea should be shelved until such
a person steps forward.


There are benefits from outreach in different formats - not everyone reads
papers anymore and our paper may need transformation to modern
communication methods if we want larger impact.

Hopefully there is at least one in this group who is willing to pick up
this idea.

                    Jacob





On Tue, Nov 8, 2022 at 11:24 AM Rahuman Sheriff <sheriff at ebi.ac.uk> wrote:

> Jacob,
> I already overstretched my bandwidth, so I wouldn’t be able to contribute
> this time, unfortunately.
> Sheriff
>
>
> On 7 Nov 2022, at 20:24, James Osborne <jmosborne at unimelb.edu.au> wrote:
>
> Jacob
>
> I personally am not a fan of the podcast / videocast so don’t want to be
> involved but I’m absolutely fine if you (and others) want to go down that
> route.
>
> All the best
>
> James
>
>
> *From: *Vp-reproduce-subgroup <
> vp-reproduce-subgroup-bounces at lists.simtk.org> on behalf of Jacob Barhak <
> jacob.barhak at gmail.com>
> *Date: *Tuesday, 8 November 2022 at 6:25 am
> *To: *vp-integration-subgroup at lists.simtk.org <
> vp-integration-subgroup at lists.simtk.org>,
> vp-reproduce-subgroup at lists.simtk.org <
> vp-reproduce-subgroup at lists.simtk.org>
> *Subject: *Re: [Vp-reproduce-subgroup] Follow-up of our publication in
> Frontiers with SCIPOD
> Greeting paper contributors,
>
> It seems the message did not reach your emails so I am trying it again to
> make sure communications are working.
>
> I will appreciate a response to know the message is not ignored.
>
> Hopefully someone is interest in the suggestion.
>
>         Jacob
>
>
> On Tue, Nov 1, 2022, 20:16 Jacob Barhak <jacob.barhak at gmail.com> wrote:
>
> Greeting paper contributors,
>
> No one has responded to the mail I sent. Since there are 18 of us, I
> assume it's because a reminder is needed and not because if no interest so
> I am sending this reminder.
>
> Hopefully some of you will respond this time.
>
>                Jacob
>
> On Mon, Oct 24, 2022 at 1:45 PM Jacob Barhak <jacob.barhak at gmail.com>
> wrote:
>
> Greetings paper contributors,
>
> You may recall our paper:
>
>    - Karr Jonathan, Malik-Sheriff Rahuman S., Osborne James,
>    Gonzalez-Parra Gilberto, Forgoston Eric, Bowness Ruth, Liu Yaling, Thompson
>    Robin, Garira Winston, Barhak Jacob, Rice John, Torres Marcella, Dobrovolny
>    Hana M., Tang Tingting, Waites William, Glazier James A., Faeder James R.,
>    Kulesza Alexander. Model Integration in Computational Biology: The Role of
>    Reproducibility, Credibility and Utility. Frontiers in Systems Biology, Vol
>    2. 2022. *https://doi.org/10.3389/fsysb.2022.822606
>    <https://doi.org/10.3389/fsysb.2022.822606>*
>
>
> This paper attracted some attention and I received an email from  SCIPOD
> about summarizing it in a podcast/video cast. You can find the publisher
> here: https://www.scipod.global/
>
> I believe this is a good idea and will reach a larger audience and
> increase awareness of the problem and outreach.
>
> I personally decided to create a videocast of my own disease modeling work
> and in my own personal opinion, it may be worth doing the same for our
> group paper.
>
> Since there are 18 of us signed on the paper I cannot make a decision for
> all of you. Therefore I am writing to you to see if you are interested in
> amplifying our outreach and making a podcast or the paper.
>
> Here is a link that explains what SCIPOD does and how it works:
> https://drive.google.com/file/d/1eJGav0Y22mlpg2RF__51_oXFWyo6uLcY/view
>
> I ask that you read this and then answer the following questions:
>
> 1. Are you interested in disseminating a podcast/videocast version of our
> paper with SCIPOD ?
>
> 2. If you are interested, how do you suggest handling the publication fee?
>
> 3. Do you prefer a podcast or a videocast?  I am sending examples of
> Video:
> https://www.scipod.global/eric-hinterman-optimising-oxygen-production-on-mars/
>
> Audio:
> https://www.scipod.global/dr-jennifer-botha-analysing-bones-to-gain-insight-into-mammalian-evolution/
>
> Feel free to open the discussion on this - I am just trying to see if
> there is interest and how much. Once we get an idea how you all think, we
> can figure out the next steps if there is interest.
>
> Looking forward to your replies.
>
>                  Jacob
>
>
>
>
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