<div dir="ltr"><div dir="ltr">Here is a link to a meeting poll for next Monday/Tuesday, 17/18 May. Please fill out by Friday, 14 May, so we can set a day/time to discuss the revision.<div><br></div><div><a href="https://whenisgood.net/kdrzmkj" target="_blank" style="color:blue;font-family:sans-serif;text-align:center">http://whenisgood.net/kdrzmkj</a><br><div><br></div><div>Cheers,</div><div><br></div><div>Eric<br clear="all"><div><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><span>---------------------<br>Dr. Eric Forgoston<br>Professor of Applied Mathematics<br>Chair, Department of </span><span><span><span>Applied Mathematics and Statistics</span></span><br>Montclair State University<br>Montclair, NJ 07043 USA<br>+1 973 655-7242 <br><span><a href="https://eric-forgoston.github.io/" target="_blank">https://eric-forgoston.github.io/</a></span></span><br><div style="display:inline"></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div><br></div></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, May 12, 2021 at 2:09 PM John Gennari <<a href="mailto:gennari@uw.edu">gennari@uw.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-style:solid;border-left-color:rgb(204,204,204);padding-left:1ex">
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<p><br>
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<p>This is definitely a good idea. The challenge might be to
schedule a time when a sufficient quorum of us are available....</p>
<p>My plan over the rest of this week is to draft up a significant
re-working of the paper, and then distribute that to all. This
won't be a complete revision, but rather some example of the kinds
of things to say, and some outlines of the proposed
re-organization. I should have this done by Friday, or this
weekend at the latest. So then a Zoom call next week (Monday, May
17?) might make sense to talk thru the ideas that I send out by
this Friday. <br>
</p>
<p>-John G.</p>
<p><br>
</p>
<div>On 5/11/2021 7:37 PM, Eric Forgoston
wrote:<br>
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<div>Dear all,</div>
<div><br>
</div>
It is probably worth having a zoom chat to discuss the revision
so that we are all working in concert. In particular, John
Gennari sent an email last week on May 3 with some thoughts that
are well-worth discussing.
<div><br>
</div>
<div>Is there interest in doing this?</div>
<div><br>
</div>
<div>Cheers,</div>
<div><br>
</div>
<div>Eric<br>
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<div><span>---------------------<br>
Dr. Eric Forgoston<br>
Professor of Applied
Mathematics<br>
Chair, Department of </span><span><span><span>Applied
Mathematics and
Statistics</span></span><br>
Montclair State
University<br>
Montclair, NJ 07043
USA<br>
+1 973 655-7242 <br>
<span><a href="https://eric-forgoston.github.io/" target="_blank">https://eric-forgoston.github.io/</a></span></span><br>
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<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Tue, May 11, 2021 at 10:26
AM Jacob Barhak <<a href="mailto:jacob.barhak@gmail.com" target="_blank">jacob.barhak@gmail.com</a>> wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-style:solid;border-left-color:rgb(204,204,204);padding-left:1ex">
<div dir="ltr">Greetings white paper contributors,<br>
<div><br>
</div>
<div>The voting period is over and the vote did not change,
so it is now time to act.</div>
<div><br>
</div>
<div>The paper will be revised as requested by 10 voters and
the target journal will be Bioinformatics - James Glazier
and Yaling Liu will share publication costs.</div>
<div><br>
</div>
<div>All those who asked to revise are requested to make the
revisions and discuss those.</div>
<div><br>
</div>
<div>I ask to reach a revised version by May 25 so that we
can finish an approval round by June 1st.</div>
<div><br>
</div>
<div>So far only Sheriff provided suggestions for revisions
prior to submission
so I suggest we start discussing those:</div>
<div><a href="https://docs.google.com/document/d/1Ag4ipuybjtthxgV0YjXqYP7AwwNSYcWh/edit" target="_blank">https://docs.google.com/document/d/1Ag4ipuybjtthxgV0YjXqYP7AwwNSYcWh/edit</a><br>
</div>
<div><br>
</div>
<div>However, since it is out of format and out of date, I
suggest that all those who want to make changes login and
request to access the main document and introduce changes
there:</div>
<div><a href="https://docs.google.com/document/d/1IMEgmdNkx-EsnOjGuegpenSIMmKIkK00Lc8Gred3QxM/edit?usp=sharing" target="_blank">https://docs.google.com/document/d/1IMEgmdNkx-EsnOjGuegpenSIMmKIkK00Lc8Gred3QxM/edit?usp=sharing</a><br>
</div>
<div><br>
</div>
<div>I do ask that this will not be delayed any further and
those who asked for changes give this task priority so it
can be completed in time.</div>
<div><br>
</div>
<div>I look forward to your contributions. </div>
<div><br>
</div>
<div> Jacob</div>
<div><br>
</div>
</div>
<br>
<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Sun, May 9, 2021 at
4:25 PM Jacob Barhak <<a href="mailto:jacob.barhak@gmail.com" target="_blank">jacob.barhak@gmail.com</a>>
wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-style:solid;border-left-color:rgb(204,204,204);padding-left:1ex">
<div dir="ltr">Greetings white paper contributors,
<div><br>
</div>
<div>Allow me to remind you that the Voting and vote
changes are still possible until 11-May 1am CDT </div>
<div><br>
</div>
<div>The current votes I saw are:</div>
<div><br>
10 votes for revision<br>
Jonathan Karr<br>
Eric Forgoston<br>
William Waites<br>
James Glazier - RS Interface or Bioinformatics<br>
Rahuman Sheriff<br>
Yaling Liu - Bioinformatics<br>
John Rice<br>
Winston Garira<br>
Gilberto Gonzalez-Parra<br>
James Osborne</div>
<div><br>
It seems 2 people supported Bioinformatics - James
Glazier and Yaling Liu so if this vote is accepted,
they will split publication costs and the terget venue
for revisions will be Bioinformatics. <br>
<br>
There is currently 1 minority vote:<br>
Jacob Barhak for direct submission to Nature -
Scientific Reports </div>
<div><br>
</div>
<div>If revision is selected, time will be limited, so I
suggest those who voted to start working on
revisions. </div>
<div><br>
</div>
<div>Hopefully this reminder will move us forward.</div>
<div><br>
</div>
<div> Jacob</div>
<div><br>
</div>
<div><br>
</div>
</div>
<br>
<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Sat, May 1, 2021 at
12:18 PM Jacob Barhak <<a href="mailto:jacob.barhak@gmail.com" target="_blank">jacob.barhak@gmail.com</a>>
wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-style:solid;border-left-color:rgb(204,204,204);padding-left:1ex">
<div dir="ltr">Greetings white paper contributors,
<div><br>
</div>
<div>It is time to vote again for the target venue.
Here are the options again. </div>
<div>
<div>
<ol>
<li style="margin-left:15px">Cureus -
resubmission after addressing editor
comments</li>
<li style="margin-left:15px">Nature - if you <span>vote</span> for
this venue please specify flavour such as
Nature Scientific Reports</li>
<li style="margin-left:15px">Science</li>
<li style="margin-left:15px">Briefings in
Bioinformatics</li>
<li style="margin-left:15px">Trends in
Biotechnology - requires distilling the
paper</li>
<li style="margin-left:15px">Journal of The
Royal Society Interface<br>
</li>
<li style="margin-left:15px">Annual Review of
Public Health<br>
</li>
<li style="margin-left:15px">BMJ</li>
<li style="margin-left:15px">Annual Review of
Biomedical Engineering<br>
</li>
<li style="margin-left:15px">F1000research -
if you <span>vote</span> for this this venue
please specify Gateway / Collection </li>
<li style="margin-left:15px">bulletin of
mathematical biology<br>
</li>
<li style="margin-left:15px">Bioinformatics.<br>
</li>
<li style="margin-left:15px">Do not submit now
- instead open for revisions for 2 weeks and
then submit. If you choose this option also
vote for the target venue after revisions so
that we will not have to delay further. </li>
</ol>
<div><br>
</div>
</div>
<div>I will ask that contributors pick one journal
from that list - I ask that you REPLY ALL so
votes will be transparent and time of vote will
be registered since first to vote will break
ties.</div>
<div><br>
</div>
<div>The voting period will be until Tuesday
11-May 1am CDT </div>
</div>
<div><br>
</div>
<div>Again, if a journal costs for open publication,
whoever voted, will split publication costs. If
anyone on this list is funded for this, please
vote. </div>
<div><br>
</div>
<div>I urge contributors to vote - just so that we
will have a preference order to follow in case of
rejection.</div>
<div><br>
</div>
<div>Looking forward to your votes. </div>
<div><br>
</div>
<div> Jacob</div>
</div>
</blockquote>
</div>
</blockquote>
</div>
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