kalispera Vasili, What forum did you post your question on? I would like to answer on there but I can't find it. To answer, MMB is currently still a single-processor code. You will unfortunately get no speedup from using a quad core machine. I can perhaps provide advice on how to speed up your calculation though. You will want to reduce degrees of freedom, and make sure you have no fast oscillations in your system that might force a small time step size. Let me know if you want help with this. Sam
Hello sam,
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Dear Dr Flores,
I use MMB 2.13 in a quad-core computer (8GB RAM) and Ubuntu 13.04 64bit for folding an RNA. However, the job uses just one of the four available cores. I am wondering if I could share it to all four of them.
Many thanks. Vasiliki