Hi Zhiyong, Why do you want to compile from source? I have Linux (and Windows and Mac) binaries here: https://simtk.org/project/xml/downloads.xml?group_id=359 Sam On Oct 29, 2010, at 11:53 PM, Zhiyong Wang wrote:
Hi, I passed cmake step but got stuck at make. I got those information when I tried to compile source codes of rnabuilder 2.0. Anyone can help me? Thanks a lot.
[ 0%] Built target COPY_LAPACK [ 20%] Building CXX object CMakeFiles/RNABuilder.dir/src/RNABuilder.o In file included from /usr/include/c++/4.4/ext/hash_map:60, from /usr/local/SimTK/include/molmodel/internal/VoxelHash.h:11, from /usr/local/SimTK/include/molmodel/internal/AtomSubsystem.h:6, from /usr/local/SimTK/include/SimTKmolmodel.h:90, from /home/wzy/packages/rnabuild/src/rnatoolbox/trunk/src/RNABuilder.cpp:34: /usr/include/c++/4.4/backward/backward_warning.h:28: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. In file included from /usr/local/SimTK/include/SimTKcommon/basics.h:52, from /usr/local/SimTK/include/SimTKcommon.h:40, from /usr/local/SimTK/include/SimTKsimbody.h:70, from /usr/local/SimTK/include/SimTKmolmodel.h:86, from /home/wzy/packages/rnabuild/src/rnatoolbox/trunk/src/RNABuilder.cpp:34: /usr/local/SimTK/include/SimTKcommon/internal/String.h:296: error: explicit template specialization cannot have a storage class /usr/local/SimTK/include/SimTKcommon/internal/String.h:301: error: explicit template specialization cannot have a storage class make[2]: *** [CMakeFiles/RNABuilder.dir/src/RNABuilder.o] Error 1 make[1]: *** [CMakeFiles/RNABuilder.dir/all] Error 2 make: *** [all] Error 2
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