[RNABuilder-help] About compiling the source codes.

[Zhiyong Wang]

Hi, I passed cmake step but got stuck at make. I got those information
when I tried to compile source codes of rnabuilder 2.0.
Anyone can help me? Thanks a lot.


[  0%] Built target COPY_LAPACK
[ 20%] Building CXX object CMakeFiles/RNABuilder.dir/src/RNABuilder.o
In file included from /usr/include/c++/4.4/ext/hash_map:60,
                 from /usr/local/SimTK/include/molmodel/internal/VoxelHash.h:11,
                 from
/usr/local/SimTK/include/molmodel/internal/AtomSubsystem.h:6,
                 from /usr/local/SimTK/include/SimTKmolmodel.h:90,
                 from
/home/wzy/packages/rnabuild/src/rnatoolbox/trunk/src/RNABuilder.cpp:34:
/usr/include/c++/4.4/backward/backward_warning.h:28: warning: #warning
This file includes at least one deprecated or antiquated header which
may be removed without further notice at a future date. Please use a
non-deprecated interface with equivalent functionality instead. For a
listing of replacement headers and interfaces, consult the file
backward_warning.h. To disable this warning use -Wno-deprecated.
In file included from /usr/local/SimTK/include/SimTKcommon/basics.h:52,
                 from /usr/local/SimTK/include/SimTKcommon.h:40,
                 from /usr/local/SimTK/include/SimTKsimbody.h:70,
                 from /usr/local/SimTK/include/SimTKmolmodel.h:86,
                 from
/home/wzy/packages/rnabuild/src/rnatoolbox/trunk/src/RNABuilder.cpp:34:
/usr/local/SimTK/include/SimTKcommon/internal/String.h:296: error:
explicit template specialization cannot have a storage class
/usr/local/SimTK/include/SimTKcommon/internal/String.h:301: error:
explicit template specialization cannot have a storage class
make[2]: *** [CMakeFiles/RNABuilder.dir/src/RNABuilder.o] Error 1
make[1]: *** [CMakeFiles/RNABuilder.dir/all] Error 2
make: *** [all] Error 2


-- 
Wang Zhiyong
TTI-C